Amine Chemical Structure

1. Identification

Summary

Amine denotes the amino functional group in which nitrogen bears one to three carbon substituents: primary (R–NH₂), secondary (R₂NH), tertiary (R₃N); quaternary ammonium (R₄N⁺) is permanently charged. Typical basicity (pKₐH): aliphatic amines ~9–11; anilines ~4–6 (weaker). Strong hydrogen bonding elevates boiling points vs hydrocarbons; amines are H-bond donors (1°/2°) and acceptors (all).

Brand Names

Not applicable.

Name

Amine (amino functional group)

Background

Subclasses: aliphatic, aromatic (anilines), heterocyclic; salts with mineral/organic acids improve aqueous solubility (e.g., HCl, sulfate, tartrate salts). Spectroscopy: IR N–H stretch 3300–3500 cm⁻¹ (1°: two bands; 2°: one; 3°: none), C–N stretch ~1020–1250 cm⁻¹; ¹H NMR N–H often broad/solvent-exchangeable.

Modality

Functional group (class of small molecules)

Groups

Endogenous metabolites and exogenous chemicals; core pharmacophore in many APIs

Structure

Generic amine structures showing primary, secondary, tertiary, and quaternary ammonium forms; basic Lewis site, H-bond donor/acceptor behavior; typical pKₐH ~9–11 (aliphatic), ~4–6 (anilines).
Amine functional group, primary/secondary/tertiary amines (R–NH2, R2NH, R3N) and quaternary ammonium (R4N+), 2D skeletal formulas

Weight

Not applicable (class)

Chemical Formula

R–NH₂ / R₂NH / R₃N (quaternary: R₄N⁺)

Synonyms

Amino group; Alkanamine/Aniline (subclasses); Trialkylamine; Quaternary ammonium (salt)

External IDs

Not applicable (class)


2. Pharmacology

Indication

Not a drug; functional group used across medicines.

Associated Conditions

Widespread in neurotransmitters, amino acids, alkaloids, and pharmaceuticals.

Associated Therapies

Medicinal chemistry: protonatable amine → water-soluble salt, tertiary amine for receptor ionic contacts, quaternary ammonium for peripheral restriction.

Contraindications & Blackbox Warnings

Not applicable at group level.

Pharmacodynamics

Chemical basicity: protonation ↔ deprotonation equilibrium governs ionization, permeability, target binding, and salt formation.

Mechanism of action

Chemical, not pharmacologic: Lewis base; nucleophilic at N; forms amides (acylation), imines/enamines (with carbonyls), quaternary salts (alkylation).

Absorption

Ionization (pH-dependent) controls membrane crossing: unionized base permeates membranes; ammonium salts enhance dissolution and may reduce permeability.

Volume of distribution / Protein binding / Metabolism / Elimination / Half-life / Clearance

Scaffold-dependent (not defined at group level).

Adverse Effects / Toxicity

Not applicable to the group per se.

Pathways

High-yield transformations: reductive amination, acylation → amide, alkylation → 4° ammonium, Gabriel synthesis (1° amines), Hofmann elimination (from 4° ammonium hydroxides), diazotization/Sandmeyer (anilines), carbamate/urea formation.

Pharmacogenomic Effects/ADRs

Not applicable.


3. Interactions

Drug Interactions

Chemical level: salt formation with acids, metal coordination, H-bonding/ionic contacts in proteins and receptors. Quaternary ammonium groups interact with anion exchangers and ACh receptors (scaffold dependent).

Food Interactions

pH and co-solutes modulate ionization and dissolution (formulation dependent).


4. Categories

ATC Codes

None (functional group)

Drug Categories

Functional group; Basic heteroatom motif; Pharmacophore

Chemical Taxonomy

sp³ nitrogen (pyramidal; inverts via umbrella motion unless quaternary); basic Lewis site; 1°/2° N–H donors, all are H-bond acceptors; quaternary ammonium is permanently cationic.

Affected organisms

Not applicable


5. Chemical Identifiers

UNII / CAS / InChI / InChIKey

Not applicable for the class.
Generic SMILES: RNH2 / RN(R)R / N+(R)R

IUPAC Name

Amine functional group (amino group)


6. References

IUPAC Gold Book — definitions of amine, ammonium, and basicity; nomenclature conventions.
Clayden, Greeves, Warren. Organic Chemistry — amine structure/basicity, spectroscopy, and reactivity (acylation, alkylation, reductive amination).
March’s Advanced Organic Chemistry — mechanistic detail (Gabriel synthesis, Hofmann elimination, diazotization/Sandmeyer for anilines).
Silverstein et al., Spectrometric Identification of Organic Compounds — IR/NMR signatures of amines.

Leave a Comment